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Crossing the LINE Toward Genomic Instability: LINE-1 Retrotransposition in Cancer

Overview of attention for article published in Frontiers in Chemistry, December 2015
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Title
Crossing the LINE Toward Genomic Instability: LINE-1 Retrotransposition in Cancer
Published in
Frontiers in Chemistry, December 2015
DOI 10.3389/fchem.2015.00068
Pubmed ID
Authors

Jacqueline R. Kemp, Michelle S. Longworth

Abstract

Retrotransposons are repetitive DNA sequences that are positioned throughout the human genome. Retrotransposons are capable of copying themselves and mobilizing new copies to novel genomic locations in a process called retrotransposition. While most retrotransposon sequences in the human genome are incomplete and incapable of mobilization, the LINE-1 retrotransposon, which comprises~17% of the human genome, remains active. The disruption of cellular mechanisms that suppress retrotransposon activity is linked to the generation of aneuploidy, a potential driver of tumor development. When retrotransposons insert into a novel genomic region, they have the potential to disrupt the coding sequence of endogenous genes and alter gene expression, which can lead to deleterious consequences for the organism. Additionally, increased LINE-1 copy numbers provide more chances for recombination events to occur between retrotransposons, which can lead to chromosomal breaks and rearrangements. LINE-1 activity is increased in various cancer cell lines and in patient tissues resected from primary tumors. LINE-1 activity also correlates with increased cancer metastasis. This review aims to give a brief overview of the connections between LINE-1 retrotransposition and the loss of genome stability. We will also discuss the mechanisms that repress retrotransposition in human cells and their links to cancer.

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The data shown below were collected from the profiles of 2 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 93 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United Kingdom 1 1%
Mexico 1 1%
Unknown 91 98%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 17 18%
Researcher 16 17%
Student > Master 13 14%
Student > Bachelor 9 10%
Student > Doctoral Student 6 6%
Other 13 14%
Unknown 19 20%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 36 39%
Agricultural and Biological Sciences 24 26%
Medicine and Dentistry 6 6%
Pharmacology, Toxicology and Pharmaceutical Science 2 2%
Computer Science 2 2%
Other 3 3%
Unknown 20 22%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 21 March 2016.
All research outputs
#17,778,896
of 22,835,198 outputs
Outputs from Frontiers in Chemistry
#1,721
of 5,926 outputs
Outputs of similar age
#265,188
of 390,452 outputs
Outputs of similar age from Frontiers in Chemistry
#8
of 10 outputs
Altmetric has tracked 22,835,198 research outputs across all sources so far. This one is in the 19th percentile – i.e., 19% of other outputs scored the same or lower than it.
So far Altmetric has tracked 5,926 research outputs from this source. They receive a mean Attention Score of 2.0. This one has gotten more attention than average, scoring higher than 62% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 390,452 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 27th percentile – i.e., 27% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 10 others from the same source and published within six weeks on either side of this one. This one has scored higher than 2 of them.