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Quantification of fungal abundance on cultural heritage using real time PCR targeting the β-actin gene

Overview of attention for article published in Frontiers in Microbiology, May 2014
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Title
Quantification of fungal abundance on cultural heritage using real time PCR targeting the β-actin gene
Published in
Frontiers in Microbiology, May 2014
DOI 10.3389/fmicb.2014.00262
Pubmed ID
Authors

Jörg Ettenauer, Guadalupe Piñar, Hakim Tafer, Katja Sterflinger

Abstract

The traditional methodology used for the identification of microbes colonizing our cultural heritage was the application of cultivation methods and/or microscopy. This approach has many advantages, as living microorganisms may be obtained for physiological investigations. In addition, these techniques allow the quantitative and qualitative assessment of the investigated environment. Quantitative analyses are done by plate count and the determination of abundance by the colony forming unit (CFU). Nevertheless, these techniques have many drawbacks that lead to an underestimation of the cell numbers and do not provide a comprehensive overview of the composition of the inhabiting microbiota. In the last decades, several molecular techniques have been developed enabling many advantages over the cultivation approach. Mainly PCR-based, fingerprinting techniques allow a qualitative detection and identification of the microbiota. In this study, we developed a real time PCR method as a simple, rapid and reliable tool to detect and quantify fungal abundance using the β-actin gene, which is known to appear as a single-copy gene in fungi. To this end, five different indoor thermal insulation materials applied for historical buildings that were previously tested for their bio-susceptibility against various fungi were subjected to qPCR analyses. The obtained results were compared with those obtained from a previous study investigating the bio-susceptibility of the insulation materials using classical cultivation experiments. Both results correlated well, revealing that Perlite plaster was the most suitable insulation material, showing the lowest fungal CFU and qPCR values. In contrast, insulations made of wood showed to be not recommendable from the microbiological point of view. In addition, the potential of qPCR was tested in other materials of cultural heritage, as old parchments, showing to be a suitable method for measuring fungal abundance in these delicate materials.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 94 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Colombia 1 1%
Portugal 1 1%
Unknown 92 98%

Demographic breakdown

Readers by professional status Count As %
Researcher 18 19%
Student > Ph. D. Student 16 17%
Student > Master 10 11%
Student > Bachelor 8 9%
Student > Doctoral Student 5 5%
Other 13 14%
Unknown 24 26%
Readers by discipline Count As %
Agricultural and Biological Sciences 28 30%
Biochemistry, Genetics and Molecular Biology 14 15%
Environmental Science 5 5%
Medicine and Dentistry 5 5%
Engineering 5 5%
Other 12 13%
Unknown 25 27%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 28 May 2014.
All research outputs
#17,721,395
of 22,756,196 outputs
Outputs from Frontiers in Microbiology
#17,017
of 24,628 outputs
Outputs of similar age
#155,141
of 226,672 outputs
Outputs of similar age from Frontiers in Microbiology
#108
of 165 outputs
Altmetric has tracked 22,756,196 research outputs across all sources so far. This one is in the 19th percentile – i.e., 19% of other outputs scored the same or lower than it.
So far Altmetric has tracked 24,628 research outputs from this source. They typically receive a little more attention than average, with a mean Attention Score of 6.3. This one is in the 22nd percentile – i.e., 22% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 226,672 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 28th percentile – i.e., 28% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 165 others from the same source and published within six weeks on either side of this one. This one is in the 27th percentile – i.e., 27% of its contemporaries scored the same or lower than it.