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Replication slippage of the thermophilic DNA polymerases B and D from the Euryarchaeota Pyrococcus abyssi

Overview of attention for article published in Frontiers in Microbiology, August 2014
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  • In the top 25% of all research outputs scored by Altmetric
  • Good Attention Score compared to outputs of the same age (79th percentile)
  • High Attention Score compared to outputs of the same age and source (82nd percentile)

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1 X user
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1 patent
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4 Wikipedia pages

Citations

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25 Dimensions

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49 Mendeley
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Title
Replication slippage of the thermophilic DNA polymerases B and D from the Euryarchaeota Pyrococcus abyssi
Published in
Frontiers in Microbiology, August 2014
DOI 10.3389/fmicb.2014.00403
Pubmed ID
Authors

Melissa Castillo-Lizardo, Ghislaine Henneke, Enrique Viguera

Abstract

Replication slippage or slipped-strand mispairing involves the misalignment of DNA strands during the replication of repeated DNA sequences, and can lead to genetic rearrangements such as microsatellite instability. Here, we show that PolB and PolD replicative DNA polymerases from the archaeal model Pyrococcus abyssi (Pab) slip in vitro during replication of a single-stranded DNA template carrying a hairpin structure and short direct repeats. We find that this occurs in both their wild-type (exo+) and exonuclease deficient (exo-) forms. The slippage behavior of PabPolB and PabPolD, probably due to limited strand displacement activity, resembles that observed for the high fidelity P. furiosus (Pfu) DNA polymerase. The presence of PabPCNA inhibited PabPolB and PabPolD slippage. We propose a model whereby PabPCNA stimulates strand displacement activity and polymerase progression through the hairpin, thus permitting the error-free replication of repetitive sequences.

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X Demographics

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 49 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 1 2%
Unknown 48 98%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 13 27%
Researcher 7 14%
Student > Bachelor 7 14%
Student > Master 6 12%
Other 2 4%
Other 5 10%
Unknown 9 18%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 20 41%
Agricultural and Biological Sciences 9 18%
Immunology and Microbiology 3 6%
Chemistry 2 4%
Environmental Science 1 2%
Other 4 8%
Unknown 10 20%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 7. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 01 December 2022.
All research outputs
#4,721,786
of 23,262,131 outputs
Outputs from Frontiers in Microbiology
#4,773
of 25,540 outputs
Outputs of similar age
#46,488
of 231,389 outputs
Outputs of similar age from Frontiers in Microbiology
#30
of 173 outputs
Altmetric has tracked 23,262,131 research outputs across all sources so far. Compared to these this one has done well and is in the 79th percentile: it's in the top 25% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 25,540 research outputs from this source. They typically receive a little more attention than average, with a mean Attention Score of 6.4. This one has done well, scoring higher than 81% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 231,389 tracked outputs that were published within six weeks on either side of this one in any source. This one has done well, scoring higher than 79% of its contemporaries.
We're also able to compare this research output to 173 others from the same source and published within six weeks on either side of this one. This one has done well, scoring higher than 82% of its contemporaries.