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Data management routines for reproducible research using the G-Node Python Client library

Overview of attention for article published in Frontiers in Neuroinformatics, March 2014
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About this Attention Score

  • In the top 25% of all research outputs scored by Altmetric
  • High Attention Score compared to outputs of the same age (81st percentile)
  • Above-average Attention Score compared to outputs of the same age and source (60th percentile)

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7 X users
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2 Google+ users

Citations

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66 Mendeley
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2 CiteULike
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Title
Data management routines for reproducible research using the G-Node Python Client library
Published in
Frontiers in Neuroinformatics, March 2014
DOI 10.3389/fninf.2014.00015
Pubmed ID
Authors

Andrey Sobolev, Adrian Stoewer, Michael Pereira, Christian J. Kellner, Christian Garbers, Philipp L. Rautenberg, Thomas Wachtler

Abstract

Structured, efficient, and secure storage of experimental data and associated meta-information constitutes one of the most pressing technical challenges in modern neuroscience, and does so particularly in electrophysiology. The German INCF Node aims to provide open-source solutions for this domain that support the scientific data management and analysis workflow, and thus facilitate future data access and reproducible research. G-Node provides a data management system, accessible through an application interface, that is based on a combination of standardized data representation and flexible data annotation to account for the variety of experimental paradigms in electrophysiology. The G-Node Python Library exposes these services to the Python environment, enabling researchers to organize and access their experimental data using their familiar tools while gaining the advantages that a centralized storage entails. The library provides powerful query features, including data slicing and selection by metadata, as well as fine-grained permission control for collaboration and data sharing. Here we demonstrate key actions in working with experimental neuroscience data, such as building a metadata structure, organizing recorded data in datasets, annotating data, or selecting data regions of interest, that can be automated to large degree using the library. Compliant with existing de-facto standards, the G-Node Python Library is compatible with many Python tools in the field of neurophysiology and thus enables seamless integration of data organization into the scientific data workflow.

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X Demographics

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 66 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 2 3%
Germany 1 2%
India 1 2%
Sweden 1 2%
Spain 1 2%
Serbia 1 2%
Unknown 59 89%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 17 26%
Researcher 9 14%
Student > Bachelor 8 12%
Student > Postgraduate 5 8%
Student > Master 5 8%
Other 13 20%
Unknown 9 14%
Readers by discipline Count As %
Agricultural and Biological Sciences 11 17%
Engineering 10 15%
Neuroscience 10 15%
Computer Science 10 15%
Social Sciences 4 6%
Other 11 17%
Unknown 10 15%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 8. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 05 March 2014.
All research outputs
#4,351,802
of 23,577,654 outputs
Outputs from Frontiers in Neuroinformatics
#227
of 774 outputs
Outputs of similar age
#42,234
of 222,679 outputs
Outputs of similar age from Frontiers in Neuroinformatics
#6
of 15 outputs
Altmetric has tracked 23,577,654 research outputs across all sources so far. Compared to these this one has done well and is in the 81st percentile: it's in the top 25% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 774 research outputs from this source. They typically receive more attention than average, with a mean Attention Score of 8.1. This one has gotten more attention than average, scoring higher than 70% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 222,679 tracked outputs that were published within six weeks on either side of this one in any source. This one has done well, scoring higher than 81% of its contemporaries.
We're also able to compare this research output to 15 others from the same source and published within six weeks on either side of this one. This one has gotten more attention than average, scoring higher than 60% of its contemporaries.