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A generative spike train model with time-structured higher order correlations

Overview of attention for article published in Frontiers in Computational Neuroscience, January 2013
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Title
A generative spike train model with time-structured higher order correlations
Published in
Frontiers in Computational Neuroscience, January 2013
DOI 10.3389/fncom.2013.00084
Pubmed ID
Authors

James Trousdale, Yu Hu, Eric Shea-Brown, Krešimir Josić

Abstract

Emerging technologies are revealing the spiking activity in ever larger neural ensembles. Frequently, this spiking is far from independent, with correlations in the spike times of different cells. Understanding how such correlations impact the dynamics and function of neural ensembles remains an important open problem. Here we describe a new, generative model for correlated spike trains that can exhibit many of the features observed in data. Extending prior work in mathematical finance, this generalized thinning and shift (GTaS) model creates marginally Poisson spike trains with diverse temporal correlation structures. We give several examples which highlight the model's flexibility and utility. For instance, we use it to examine how a neural network responds to highly structured patterns of inputs. We then show that the GTaS model is analytically tractable, and derive cumulant densities of all orders in terms of model parameters. The GTaS framework can therefore be an important tool in the experimental and theoretical exploration of neural dynamics.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 66 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Japan 1 2%
United Kingdom 1 2%
Germany 1 2%
Unknown 63 95%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 17 26%
Researcher 13 20%
Student > Master 9 14%
Professor 6 9%
Professor > Associate Professor 5 8%
Other 11 17%
Unknown 5 8%
Readers by discipline Count As %
Agricultural and Biological Sciences 16 24%
Physics and Astronomy 9 14%
Mathematics 9 14%
Neuroscience 9 14%
Computer Science 6 9%
Other 10 15%
Unknown 7 11%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 25 July 2013.
All research outputs
#17,691,177
of 22,714,025 outputs
Outputs from Frontiers in Computational Neuroscience
#957
of 1,336 outputs
Outputs of similar age
#210,191
of 280,752 outputs
Outputs of similar age from Frontiers in Computational Neuroscience
#82
of 131 outputs
Altmetric has tracked 22,714,025 research outputs across all sources so far. This one is in the 19th percentile – i.e., 19% of other outputs scored the same or lower than it.
So far Altmetric has tracked 1,336 research outputs from this source. They typically receive a little more attention than average, with a mean Attention Score of 6.2. This one is in the 21st percentile – i.e., 21% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 280,752 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 22nd percentile – i.e., 22% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 131 others from the same source and published within six weeks on either side of this one. This one is in the 30th percentile – i.e., 30% of its contemporaries scored the same or lower than it.