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Untangling statistical and biological models to understand network inference: the need for a genomics network ontology

Overview of attention for article published in Frontiers in Genetics, August 2014
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  • Good Attention Score compared to outputs of the same age (68th percentile)
  • Above-average Attention Score compared to outputs of the same age and source (61st percentile)

Mentioned by

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6 X users
googleplus
1 Google+ user

Citations

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15 Dimensions

Readers on

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56 Mendeley
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Title
Untangling statistical and biological models to understand network inference: the need for a genomics network ontology
Published in
Frontiers in Genetics, August 2014
DOI 10.3389/fgene.2014.00299
Pubmed ID
Authors

Frank Emmert-Streib, Matthias Dehmer, Benjamin Haibe-Kains

Abstract

In this paper, we shed light on approaches that are currently used to infer networks from gene expression data with respect to their biological meaning. As we will show, the biological interpretation of these networks depends on the chosen theoretical perspective. For this reason, we distinguish a statistical perspective from a mathematical modeling perspective and elaborate their differences and implications. Our results indicate the imperative need for a genomic network ontology in order to avoid increasing confusion about the biological interpretation of inferred networks, which can be even enhanced by approaches that integrate multiple data sets, respectively, data types.

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X Demographics

X Demographics

The data shown below were collected from the profiles of 6 X users who shared this research output. Click here to find out more about how the information was compiled.
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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 56 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 2 4%
Brazil 1 2%
Chile 1 2%
Russia 1 2%
United Kingdom 1 2%
Unknown 50 89%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 14 25%
Researcher 11 20%
Student > Doctoral Student 7 13%
Student > Master 7 13%
Professor > Associate Professor 3 5%
Other 10 18%
Unknown 4 7%
Readers by discipline Count As %
Computer Science 17 30%
Agricultural and Biological Sciences 11 20%
Biochemistry, Genetics and Molecular Biology 8 14%
Mathematics 3 5%
Engineering 3 5%
Other 6 11%
Unknown 8 14%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 4. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 21 September 2014.
All research outputs
#7,201,469
of 22,761,738 outputs
Outputs from Frontiers in Genetics
#2,282
of 11,758 outputs
Outputs of similar age
#72,229
of 236,210 outputs
Outputs of similar age from Frontiers in Genetics
#48
of 131 outputs
Altmetric has tracked 22,761,738 research outputs across all sources so far. This one has received more attention than most of these and is in the 67th percentile.
So far Altmetric has tracked 11,758 research outputs from this source. They receive a mean Attention Score of 3.7. This one has done well, scoring higher than 79% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 236,210 tracked outputs that were published within six weeks on either side of this one in any source. This one has gotten more attention than average, scoring higher than 68% of its contemporaries.
We're also able to compare this research output to 131 others from the same source and published within six weeks on either side of this one. This one has gotten more attention than average, scoring higher than 61% of its contemporaries.