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Virus Dynamics Are Influenced by Season, Tides and Advective Transport in Intertidal, Permeable Sediments

Overview of attention for article published in Frontiers in Microbiology, December 2017
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About this Attention Score

  • Good Attention Score compared to outputs of the same age (73rd percentile)
  • Above-average Attention Score compared to outputs of the same age and source (61st percentile)

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blogs
1 blog

Citations

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11 Dimensions

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22 Mendeley
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Title
Virus Dynamics Are Influenced by Season, Tides and Advective Transport in Intertidal, Permeable Sediments
Published in
Frontiers in Microbiology, December 2017
DOI 10.3389/fmicb.2017.02526
Pubmed ID
Authors

Verona Vandieken, Lara Sabelhaus, Tim Engelhardt

Abstract

Sandy surface sediments of tidal flats exhibit high microbial activity due to the fast and deep-reaching transport of oxygen and nutrients by porewater advection. On the other hand during low tide, limited transport results in nutrient and oxygen depletion concomitant to the accumulation of microbial metabolites. This study represents the first attempt to use flow-through reactors to investigate virus production, virus transport and the impact of tides and season in permeable sediments. The reactors were filled with intertidal sands of two sites (North beach site and backbarrier sand flat of Spiekeroog island in the German Wadden Sea) to best simulate advective porewater transport through the sediments. Virus and cell release along with oxygen consumption were measured in the effluents of reactors during continuous flow of water through the sediments as well as in tidal simulation experiments where alternating cycles with and without water flow (each for 6 h) were operated. The results showed net rates of virus production (0.3-13.2 × 106 viruses cm-3 h-1) and prokaryotic cell production (0.3-10.0 × 105 cells cm-3 h-1) as well as oxygen consumption rates (56-737 μmol l-1 h-1) to be linearly correlated reflecting differences in activity, season and location of the sediments. Calculations show that total virus turnover was fast with 2 to 4 days, whereas virus-mediated cell turnover was calculated to range between 5-13 or 33-91 days depending on the assumed burst sizes (number of viruses released upon cell lysis) of 14 or 100 viruses, respectively. During the experiments, the homogenized sediments in the reactors became vertically structured with decreasing microbial activities and increasing impact of viruses on prokaryotic mortality with depth. Tidal simulation clearly showed a strong accumulation of viruses and cells in the top sections of the reactors when the flow was halted indicating a consistently high virus production during low tide. In conclusion, cell lysis products due to virus production may fuel microbial communities in the absence of advection-driven nutrient input, but are eventually washed off the surface sediment during high tide and being transported into deeper sediment layers or into the water column together with the produced viruses.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 22 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 22 100%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 6 27%
Student > Master 6 27%
Researcher 3 14%
Student > Bachelor 2 9%
Student > Doctoral Student 1 5%
Other 1 5%
Unknown 3 14%
Readers by discipline Count As %
Environmental Science 5 23%
Agricultural and Biological Sciences 5 23%
Biochemistry, Genetics and Molecular Biology 3 14%
Earth and Planetary Sciences 2 9%
Nursing and Health Professions 1 5%
Other 1 5%
Unknown 5 23%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 6. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 13 January 2018.
All research outputs
#5,807,468
of 23,016,919 outputs
Outputs from Frontiers in Microbiology
#5,520
of 25,134 outputs
Outputs of similar age
#114,259
of 439,957 outputs
Outputs of similar age from Frontiers in Microbiology
#180
of 516 outputs
Altmetric has tracked 23,016,919 research outputs across all sources so far. This one has received more attention than most of these and is in the 74th percentile.
So far Altmetric has tracked 25,134 research outputs from this source. They typically receive a little more attention than average, with a mean Attention Score of 6.3. This one has done well, scoring higher than 77% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 439,957 tracked outputs that were published within six weeks on either side of this one in any source. This one has gotten more attention than average, scoring higher than 73% of its contemporaries.
We're also able to compare this research output to 516 others from the same source and published within six weeks on either side of this one. This one has gotten more attention than average, scoring higher than 61% of its contemporaries.