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Molecular evolution of anthocyanin pigmentation genes following losses of flower color

Overview of attention for article published in BMC Ecology and Evolution, May 2016
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  • Good Attention Score compared to outputs of the same age (66th percentile)
  • Average Attention Score compared to outputs of the same age and source

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Title
Molecular evolution of anthocyanin pigmentation genes following losses of flower color
Published in
BMC Ecology and Evolution, May 2016
DOI 10.1186/s12862-016-0675-3
Pubmed ID
Authors

Winnie W. Ho, Stacey D. Smith

Abstract

Phenotypic transitions, such as trait gain or loss, are predicted to carry evolutionary consequences for the genes that control their development. For example, trait losses can result in molecular decay of the pathways underlying the trait. Focusing on the Iochrominae clade (Solanaceae), we examine how repeated losses of floral anthocyanin pigmentation associated with flower color transitions have affected the molecular evolution of three anthocyanin pathway genes (Chi, F3h, and Dfr). We recovered intact coding regions for the three genes in all of the lineages that have lost floral pigmentation, suggesting that molecular decay is not associated with these flower color transitions. However, two of the three genes (Chi, F3h) show significantly elevated dN/dS ratios in lineages without floral pigmentation. Maximum likelihood analyses suggest that this increase is due to relaxed constraint on anthocyanin genes in the unpigmented lineages as opposed to positive selection. Despite the increase, the values for dN/dS in both pigmented and unpigmented lineages were consistent overall with purifying selection acting on these loci. The broad conservation of anthocyanin pathway genes across lineages with and without floral anthocyanins is consistent with the growing consensus that losses of pigmentation are largely achieved by changes in gene expression as opposed to structural mutations. Moreover, this conservation maintains the potential for regain of flower color, and indicates that evolutionary losses of floral pigmentation may be readily reversible.

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X Demographics

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 62 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Germany 1 2%
Unknown 61 98%

Demographic breakdown

Readers by professional status Count As %
Researcher 10 16%
Student > Master 9 15%
Student > Bachelor 9 15%
Student > Doctoral Student 8 13%
Student > Ph. D. Student 7 11%
Other 8 13%
Unknown 11 18%
Readers by discipline Count As %
Agricultural and Biological Sciences 31 50%
Biochemistry, Genetics and Molecular Biology 13 21%
Environmental Science 3 5%
Chemistry 2 3%
Medicine and Dentistry 1 2%
Other 1 2%
Unknown 11 18%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 4. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 22 April 2017.
All research outputs
#7,848,721
of 25,374,647 outputs
Outputs from BMC Ecology and Evolution
#1,809
of 3,714 outputs
Outputs of similar age
#106,318
of 319,075 outputs
Outputs of similar age from BMC Ecology and Evolution
#40
of 79 outputs
Altmetric has tracked 25,374,647 research outputs across all sources so far. This one has received more attention than most of these and is in the 68th percentile.
So far Altmetric has tracked 3,714 research outputs from this source. They typically receive a lot more attention than average, with a mean Attention Score of 12.5. This one has gotten more attention than average, scoring higher than 51% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 319,075 tracked outputs that were published within six weeks on either side of this one in any source. This one has gotten more attention than average, scoring higher than 66% of its contemporaries.
We're also able to compare this research output to 79 others from the same source and published within six weeks on either side of this one. This one is in the 49th percentile – i.e., 49% of its contemporaries scored the same or lower than it.