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Reference Genes for qPCR Analysis in Resin-Tapped Adult Slash Pine As a Tool to Address the Molecular Basis of Commercial Resinosis

Overview of attention for article published in Frontiers in Plant Science, June 2016
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Title
Reference Genes for qPCR Analysis in Resin-Tapped Adult Slash Pine As a Tool to Address the Molecular Basis of Commercial Resinosis
Published in
Frontiers in Plant Science, June 2016
DOI 10.3389/fpls.2016.00849
Pubmed ID
Authors

Júlio C. de Lima, Fernanda de Costa, Thanise N. Füller, Kelly C. da Silva Rodrigues-Corrêa, Magnus R. Kerber, Mariano S. Lima, Janette P. Fett, Arthur G. Fett-Neto

Abstract

Pine oleoresin is a major source of terpenes, consisting of turpentine (mono- and sesquiterpenes) and rosin (diterpenes) fractions. Higher oleoresin yields are of economic interest, since oleoresin derivatives make up a valuable source of materials for chemical industries. Oleoresin can be extracted from living trees, often by the bark streak method, in which bark removal is done periodically, followed by application of stimulant paste containing sulfuric acid and other chemicals on the freshly wounded exposed surface. To better understand the molecular basis of chemically-stimulated and wound induced oleoresin production, we evaluated the stability of 11 putative reference genes for the purpose of normalization in studying Pinus elliottii gene expression during oleoresinosis. Samples for RNA extraction were collected from field-grown adult trees under tapping operations using stimulant pastes with different compositions and at various time points after paste application. Statistical methods established by geNorm, NormFinder, and BestKeeper softwares were consistent in pointing as adequate reference genes HISTO3 and UBI. To confirm expression stability of the candidate reference genes, expression profiles of putative P. elliottii orthologs of resin biosynthesis-related genes encoding Pinus contorta β-pinene synthase [PcTPS-(-)β-pin1], P. contorta levopimaradiene/abietadiene synthase (PcLAS1), Pinus taeda α-pinene synthase [PtTPS-(+)αpin], and P. taeda α-farnesene synthase (PtαFS) were examined following stimulant paste application. Increased oleoresin yields observed in stimulated treatments using phytohormone-based pastes were consistent with higher expression of pinene synthases. Overall, the expression of all genes examined matched the expected profiles of oleoresin-related transcript changes reported for previously examined conifers.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 39 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 39 100%

Demographic breakdown

Readers by professional status Count As %
Unspecified 10 26%
Student > Master 6 15%
Student > Ph. D. Student 5 13%
Student > Bachelor 4 10%
Student > Doctoral Student 3 8%
Other 5 13%
Unknown 6 15%
Readers by discipline Count As %
Unspecified 10 26%
Agricultural and Biological Sciences 10 26%
Chemistry 3 8%
Environmental Science 2 5%
Medicine and Dentistry 2 5%
Other 3 8%
Unknown 9 23%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 16 June 2016.
All research outputs
#20,333,181
of 22,877,793 outputs
Outputs from Frontiers in Plant Science
#16,164
of 20,269 outputs
Outputs of similar age
#282,528
of 326,206 outputs
Outputs of similar age from Frontiers in Plant Science
#408
of 532 outputs
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