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Unique Microbial Diversity and Metabolic Pathway Features of Fermented Vegetables From Hainan, China

Overview of attention for article published in Frontiers in Microbiology, March 2018
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Title
Unique Microbial Diversity and Metabolic Pathway Features of Fermented Vegetables From Hainan, China
Published in
Frontiers in Microbiology, March 2018
DOI 10.3389/fmicb.2018.00399
Pubmed ID
Authors

Qiannan Peng, Shuaiming Jiang, Jieling Chen, Chenchen Ma, Dongxue Huo, Yuyu Shao, Jiachao Zhang

Abstract

Fermented vegetables are typically traditional foods made of fresh vegetables and their juices, which are fermented by beneficial microorganisms. Herein, we applied high-throughput sequencing and culture-dependent technology to describe the diversities of microbiota and identify core microbiota in fermented vegetables from different areas of Hainan Province, and abundant metabolic pathways in the fermented vegetables were simultaneously predicted. At the genus level, Lactobacillus bacteria were the most abundant. Lactobacillus plantarum was the most abundant species, followed by Lactobacillus fermentum, Lactobacillus pentosaceus, and Weissella cibaria. These species were present in each sample with average absolute content values greater than 1% and were thus defined as core microbiota. Analysis results based on the alpha and beta diversities of the microbial communities showed that the microbial profiles of the fermented vegetables differed significantly based on the regions and raw materials used, and the species of the vegetables had a greater effect on the microbial community structure than the region from where they were harvested. Regarding microbial functional metabolism, we observed an enrichment of metabolic pathways, including membrane transport, replication and repair and translation, which implied that the microbial metabolism in the fermented vegetables tended to be vigorous. In addition, Lactobacillus plantarum and Lactobacillus fermentum were calculated to be major metabolic pathway contributors. Finally, we constructed a network to better explain correlations among the core microbiota and metabolic pathways. This study facilitates an understanding of the differences in microbial profiles and fermentation pathways involved in the production of fermented vegetables, establishes a basis for optimally selecting microorganisms to manufacture high-quality fermented vegetable products, and lays the foundation for better utilizing tropical microbial resources.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 60 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 60 100%

Demographic breakdown

Readers by professional status Count As %
Student > Master 10 17%
Student > Bachelor 8 13%
Student > Ph. D. Student 6 10%
Researcher 5 8%
Lecturer 4 7%
Other 7 12%
Unknown 20 33%
Readers by discipline Count As %
Agricultural and Biological Sciences 13 22%
Biochemistry, Genetics and Molecular Biology 8 13%
Immunology and Microbiology 4 7%
Engineering 4 7%
Pharmacology, Toxicology and Pharmaceutical Science 2 3%
Other 9 15%
Unknown 20 33%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 22 March 2018.
All research outputs
#20,469,520
of 23,028,364 outputs
Outputs from Frontiers in Microbiology
#22,735
of 25,154 outputs
Outputs of similar age
#293,405
of 331,981 outputs
Outputs of similar age from Frontiers in Microbiology
#541
of 591 outputs
Altmetric has tracked 23,028,364 research outputs across all sources so far. This one is in the 1st percentile – i.e., 1% of other outputs scored the same or lower than it.
So far Altmetric has tracked 25,154 research outputs from this source. They typically receive a little more attention than average, with a mean Attention Score of 6.3. This one is in the 1st percentile – i.e., 1% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 331,981 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 1st percentile – i.e., 1% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 591 others from the same source and published within six weeks on either side of this one. This one is in the 1st percentile – i.e., 1% of its contemporaries scored the same or lower than it.